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IPB publications - 2012

  • Chang Z, Lu S, Chen L, Jin Q, Yang J: Causative species and serotypes of shigellosis in mainland china: systematic review and meta-analysis. PLoS One 2012, 7(12):e52515.
  • Guo D, Shi X, Arledge KC, Song D, Jiang L, Fu L, Gong X, Zhang S, Wang X, Zhang L: A Single Residue within the V5 Region of HIV-1 Envelope Facilitates Viral Escape from the Broadly Neutralizing Monoclonal Antibody VRC01. J Biol Chem 2012, 287(51):43170-43179.
  • Ren X, Liu T, Dong J, Sun L, Yang J, Zhu Y, Jin Q: Evaluating de bruijn graph assemblers on 454 transcriptomic data. PLoS One 2012, 7(12):e51188.
  • Zheng J, Liu L, Wei C, Leng W, Yang J, Li W, Wang J, Jin Q: A comprehensive proteomic analysis of Mycobacterium bovis bacillus Calmette-Guerin using high resolution Fourier transform mass spectrometry. J Proteomics 2012, 77:357-371.
  • Zheng J, Liu L, Liu C, Jin Q: Molecular Cloning and Heterologous Expression of a True Lipase in Pichia pastoris Isolated via a Metagenomic Approach. J Mol Microbiol Biotechnol 2012, 22(5):300-311.
  • Hu S, Pang X, Li J, Cen S, Jin Q, Guo F: The role of the structural domains of human BST-2 in inhibiting the release of xenotropic murine leukemia virus-related virus. Biochem Biophys Res Commun 2012, 428(1):17-23.
  • Shi D, Li H, Zhao Y, Jia Q, Coulter C, Li L, Zhu G: Extensively drug-resistant tuberculosis, central china, 2007-2009. Emerg Infect Dis 2012, 18(11):1904-1905.
  • Xue Q, Zhou Z, Lei X, Liu X, He B, Wang J, Hung T: TRIM38 Negatively Regulates TLR3-Mediated IFN-beta Signaling by Targeting TRIF for Degradation. PLoS One 2012, 7(10):e46825.
  • Yang Y, Wang Z, Ren L, Wang W, Vernet G, Paranhos-Baccala G, Jin Q, Wang J: Influenza A/H1N1 2009 Pandemic and Respiratory Virus Infections, Beijing, 2009-2010. PLoS One 2012, 7(9):e45807.
  • Yu Y, Zhang Y, Hu S, Jin D, Chen X, Jin Q, Liu H: Different Patterns of Cytokines and Chemokines Combined with IFN-gamma Production Reflect Mycobacterium tuberculosis Infection and Disease. PLoS One 2012, 7(9):e44944.
  • Chong H, Yao X, Sun J, Qiu Z, Zhang M, Waltersperger S, Wang M, Cui S, He Y: The M-T hook structure is critical for design of HIV-1 fusion inhibitors. J Biol Chem 2012, 287(41):34558-34568.
  • Wu Z, Ren X, Yang L, Hu Y, Yang J, He G, Zhang J, Dong J, Sun L, Du J, Liu L, Xue Y, Wang J, Yang F, Zhang S, Jin Q: Virome analysis for identification of novel Mammalian viruses in bat species from chinese provinces. J Virol 2012, 86(20):10999-11012.
  • Cai P, Piao X, Hou N, Liu S, Wang H, Chen Q: Identification and Characterization of Argonaute Protein, Ago2 and Its Associated Small RNAs in Schistosoma japonicum. PLoS Negl Trop Dis 2012, 6(7):e1745.
  • Guo L, Wang Y, Zhou H, Wu C, Song J, Li J, Paranhos-Baccala G, Vernet G, Wang J, Hung T: Differential seroprevalence of human bocavirus species 1-4 in beijing, china. PLoS One 2012, 7(6):e39644.
  • Liu K, Zhang Y, Hu S, Yu Y, Yang Q, Jin D, Chen X, Jin Q, Liu H: Increased levels of BAFF and APRIL related to human active pulmonary tuberculosis. PLoS One 2012, 7(6):e38429.
  • Yao X, Chong H, Zhang C, Qiu Z, Qin B, Han R, Waltersperger S, Wang M, He Y, Cui S: Structural Basis of Potent and Broad HIV-1 Fusion Inhibitor CP32M. J Biol Chem 2012, 287(32):26618-26629.
  • Cao Z, Meng J, Li X, Wu R, Huang Y, He Y: The epitope and neutralization mechanism of AVFluIgG01, a broad-reactive human monoclonal antibody against H5N1 influenza virus. PLoS One 2012, 7(5):e38126.
  • Wang J, Wu Z, Jin Q: COPI is required for enterovirus 71 replication. PLoS One 2012, 7(5):e38035.
  • Yang G, Hernandez-Rodriguez CS, Beeton ML, Wilkinson P, Ffrench-Constant RH, Waterfield NR: Pdl1 is a putative lipase that enhances Photorhabdus toxin complex secretion. PLoS Pathog 2012, 8(5):e1002692.
  • Zhang T, Du J, Liu L, Chen X, Yang F, Jin Q: Inhibitory effects and underlying mechanism of 7-hydroxyflavone phosphate ester in HeLa cells. PLoS One 2012, 7(5):e36652.
  • Yang Y, Li X, Zhang Z, Qian HZ, Ruan Y, Zhou F, Gao C, Li M, Jin Q, Gao L: Association of human papillomavirus infection and abnormal anal cytology among HIV-infected MSM in Beijing, China. PLoS One 2012, 7(4):e35983.
  • Ren X, Wang Y, Wang J, Zhang XS: A unified computational model for revealing and predicting subtle subtypes of cancers. BMC Bioinformatics 2012, 13(1):70.
  • Xiang Z, Gonzalez R, Wang Z, Ren L, Xiao Y, Li J, Li Y, Vernet G, Paranhos-Baccala G, Jin Q, Wang J: Coxsackievirus A21, enterovirus 68, and acute respiratory tract infection, China. Emerg Infect Dis 2012, 18(5):821-824.
  • Chong H, Yao X, Qiu Z, Qin B, Han R, Waltersperger S, Wang M, Cui S, He Y: Discovery of critical residues for viral entry and inhibition through structural Insight of HIV-1 fusion inhibitor CP621-652. J Biol Chem 2012, 287(24):20281-20289.
  • Hu YF, Yang F, Du J, Zhang T, Xue Y, Jin Q: Coxsackievirus B5, associated with neurological hand, foot and mouth disease, China. J Infect 2012, 65(2):189-191.
  • Li J, Ren L, Guo L, Xiang Z, Paranhos-Baccala G, Vernet G, Wang J: Evolutionary dynamics analysis of human metapneumovirus subtype A2: genetic evidence for its dominant epidemic. PLoS One 2012, 7(3):e34544.
  • Zhou F, Gao L, Li S, Li D, Zhang L, Fan W, Yang X, Yu M, Xiao D, Yan L, Zhang Z, Shi W, Luo F, Ruan Y, Jin Q: Willingness to accept HIV pre-exposure prophylaxis among Chinese men who have sex with men. PLoS One 2012, 7(3):e32329.
  • Jin WJ, Chen CF, Liao HY, Gong LL, Yuan XH, Zhao BB, Zhang D, Feng X, Liu JJ, Wang Y, Chen GF, Yan HP, He YW: Downregulation of the AU-rich RNA-binding protein ZFP36 in chronic HBV patients: implications for anti-inflammatory therapy. PLoS One 2012, 7(3):e33356.
  • Fu H, Liu L, Zhang X, Zhu Y, Zhao L, Peng J, He H, Jin Q: Common changes in global gene expression induced by RNA polymerase inhibitors in Shigella flexneri. PLoS One 2012, 7(3):e33240.
  • Yuan XH, Wang YC, Jin WJ, Zhao BB, Chen CF, Yang J, Wang JF, Guo YY, Liu JJ, Zhang D, Gong LL, He YW: Structure-based high-throughput epitope analysis of hexon proteins in B and C species human adenoviruses (HAdVs). PLoS One 2012, 7(3):e32938.
  • Chong H, Yao X, Zhang C, Cai L, Cui S, Wang Y, He Y: Biophysical property and broad anti-HIV activity of albuvirtide, a 3-maleimimidopropionic acid-modified peptide fusion inhibitor. PLoS One 2012, 7(3):e32599.
  • Si Y, Liu S, Liu X, Jacobs JL, Cheng M, Niu Y, Jin Q, Wang T, Yang W: A human claudin-1-derived peptide inhibits hepatitis C virus entry. Hepatology 2012, 56(2):507-515.
  • Zhang L, Hong Z, Lin W, Shao RX, Goto K, Hsu VW, Chung RT: ARF1 and GBF1 generate a PI4P-enriched environment supportive of hepatitis C virus replication. PLoS One 2012, 7(2):e32135.
  • Sun YC, Guo XP, Hinnebusch BJ, Darby C: The Yersinia pestis Rcs phosphorelay inhibits biofilm formation by repressing transcription of the diguanylate cyclase gene hmsT. J Bacteriol 2012, 194(8):2020-2026.
  • Cheng M, Si Y, Yang Y, Liu X, Gong Q, Zhao J, Niu Y, Li X, Jin Q, Yang W: Recombinant human interleukin 28B: anti-HCV potency, receptor usage and restricted cell-type responsiveness. J Antimicrob Chemother 2012, 67(5):1080-1087.
  • Zou T, Yao X, Qin B, Zhang M, Cai L, Shang W, Svergun DI, Wang M, Cui S, Jin Q: Crystal structure of Pseudomonas aeruginosa Tsi2 reveals a stably folded superhelical antitoxin. J Mol Biol 2012, 417(4):351-361.
  • Zhang T, Wu Z, Du J, Hu Y, Liu L, Yang F, Jin Q: Anti-Japanese-encephalitis-viral effects of kaempferol and daidzin and their RNA-binding characteristics. PLoS One 2012, 7(1):e30259.
  • Zhang X, Zhao B, Liu L, Zhu Y, Zhao Y, Jin Q: Subpopulation analysis of heteroresistance to fluoroquinolone in Mycobacterium tuberculosis isolates from Beijing, China. J Clin Microbiol 2012, 50(4):1471-1474.
  • Liu S, Cai P, Hou N, Piao X, Wang H, Hung T, Chen Q: Genome-wide identification and characterization of a panel of house-keeping genes in Schistosoma japonicum. Mol Biochem Parasitol 2012, 182(1-2):75-82.
  • Yao X, Chong H, Zhang C, Waltersperger S, Wang M, Cui S, He Y: Broad antiviral activity and crystal structure of HIV-1 fusion inhibitor sifuvirtide. J Biol Chem 2012, 287(9):6788-6796.
  • Li J, Wang Z, Gonzalez R, Xiao Y, Zhou H, Zhang J, Paranhos-Baccala G, Vernet G, Jin Q, Wang J, Hung T: Prevalence of human metapneumovirus in adults with acute respiratory tract infection in Beijing, China. J Infect 2012, 64(1):96-103.
  • Chen L, Xiong Z, Sun L, Yang J, Jin Q: VFDB 2012 update: toward the genetic diversity and molecular evolution of bacterial virulence factors. Nucleic Acids Res 2012, 40(Database issue):D641-645.
  • Guo L, Gonzalez R, Zhou H, Wu C, Vernet G, Wang Z, Wang J: Detection of three human adenovirus species in adults with acute respiratory infection in China. Eur J Clin Microbiol Infect Dis 2012, 31(6):1051-1058.


Copyright © 2012 Institute of Pathogen Biology, CAMS & PUMC