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IPB publications - 2015

  • Ren X, Fu H, Jin Q: Integrating heterogeneous genomic data to accurately identify disease subtypes. BMC Med Genomics 2015, 8:78.
  • Hu Y, Ren X, Li L, Xiao Y, Dong J, Sun L, Zhu Y, Yang F, Zhang X, Jin Q: Rapid genome sequencing and characterization of novel avian-origin influenza A H7N9 virus directly from clinical sample by semiconductor sequencing. J Clin Virol 2015, 73:84-88.
  • Su Y, Chong H, Xiong S, Qiao Y, Qiu Z, He Y: Genetic Pathway of HIV-1 Resistance to Novel Fusion Inhibitors Targeting the Gp41 Pocket. J Virol 2015, 89(24):12467-12479.
  • Du H, Yin P, Yang X, Zhang L, Jin Q, Zhu G: Enterovirus 71 2C Protein Inhibits NF-kappaB Activation by Binding to RelA(p65). Sci Rep 2015, 5:14302.
  • Gong LL, Zhao BB, Fan WF, Gong LY, Chen CF, Liu JJ, Lu X: Correlations of IFN-gamma-inducible protein-10 with the risk of chronic hepatitis B and the efficacy of interferon therapy in Asians. Int J Clin Exp Pathol 2015, 8(7):8367-8375.
  • Gao L, Jin Q: Differences in BCG vaccination and tuberculin skin-test positivity--Authors' reply. Lancet Infect Dis 2015, 15(9):1003-1005.
  • Wu C, Hou N, Piao X, Liu S, Cai P, Xiao Y, Chen Q: Non-immune immunoglobulins shield Schistosoma japonicum from host immunorecognition. Sci Rep 2015, 5:13434.
  • Liu S, Zhou X, Piao X, Wu C, Hou N, Chen Q: Comparative Analysis of Transcriptional Profiles of Adult Schistosoma japonicum from Different Laboratory Animals and the Natural Host, Water Buffalo. PLoS Negl Trop Dis 2015, 9(8):e0003993.
  • Chong H, Qiu Z, Su Y, He Y: The N-Terminal T-T Motif of a Third-Generation HIV-1 Fusion Inhibitor Is Not Required for Binding Affinity and Antiviral Activity. J Med Chem 2015, 58(16):6378-6388.
  • Gao X, Zhou H, Wu C, Xiao Y, Ren L, Paranhos-Baccala G, Guo L, Wang J: Antibody against nucleocapsid protein predicts susceptibility to human coronavirus infection. J Infect 2015, 71(5):599-602.
  • Hu S, Li J, Xu F, Mei S, Le Duff Y, Yin L, Pang X, Cen S, Jin Q, Liang C, Guo F: SAMHD1 Inhibits LINE-1 Retrotransposition by Promoting Stress Granule Formation. PLoS Genet 2015, 11(7):e1005367.
  • Qiu Z, Chong H, Yao X, Su Y, Cui S, He Y: Identification and characterization of a subpocket on the N-trimer of HIV-1 Gp41: implication for viral entry and drug target. AIDS 2015, 29(9):1015-1024.
  • Yang W, Zhang M, Chi X, Liu X, Qin B, Cui S: An intramolecular bond at cluster of differentiation 81 ectodomain is important for hepatitis C virus entry. FASEB J 2015, 29(10):4214-4226.
  • Ren L, Zhang Y, Li J, Xiao Y, Zhang J, Wang Y, Chen L, Paranhos-Baccala G, Wang J: Genetic drift of human coronavirus OC43 spike gene during adaptive evolution. Sci Rep 2015, 5:11451.
  • Qian Z, Ou X, Goes LG, Osborne C, Castano A, Holmes KV, Dominguez SR: Identification of the Receptor-Binding Domain of the Spike Glycoprotein of Human Betacoronavirus HKU1. J Virol 2015, 89(17):8816-8827.
  • Zheng J, Liu L, Liu B, Jin Q: Phosphoproteomic analysis of bacillus Calmette-Guerin using gel-based and gel-free approaches. J Proteomics 2015, 126:189-199.
  • Wang J, Chen Z, Bao L, Zhang W, Xue Y, Pang X, Zhang X, Qin C, Jin Q: Characterization of Two Human Monoclonal Antibodies Neutralizing Influenza A H7N9 Viruses. J Virol 2015, 89(17):9115-9118.
  • Zhang C, Xiao Y, Du J, Ren L, Wang J, Peng J, Jin Q: Application of Multiplex PCR Coupled with Matrix-Assisted Laser Desorption Ionization-Time of Flight Analysis for Simultaneous Detection of 21 Common Respiratory Viruses. J Clin Microbiol 2015, 53(8):2549-2554.
  • Liu X, Chi X, Gong Q, Gao L, Niu Y, Cheng M, Si Y, Wang M, Zhong J, Niu J, Yang W: Association of serum level of growth differentiation factor 15 with liver cirrhosis and hepatocellular carcinoma. PLoS One 2015, 10(5):e0127518.
  • Hou N, Piao X, Liu S, Wu C, Chen Q: Tim-3 induces Th2-biased immunity and alternative macrophage activation during Schistosoma japonicum infection. Infect Immun 2015, 83(8):3074-3082.
  • Li Z, Zhang H, Li X, Yang Y, Xin H, Li M, Feng B, Gao L: Anal Human Papillomavirus Genotyping among HIV-Positive Men Who Have Sex with Men in Xi'an, China. PLoS One 2015, 10(4):e0125120.
  • Hu Y, Ren X, Liu Y, Yang F, Liu H, Cao B, Jin Q: Serial high-resolution analysis of blood virome and host cytokines expression profile of a patient with fatal H7N9 infection by massively parallel RNA sequencing. Clin Microbiol Infect 2015, 21(7):713 e711-714.
  • Xu X, Liu T, Ren X, Liu B, Yang J, Chen L, Wei C, Zheng J, Dong J, Sun L, Zhu Y, Jin Q: Proteogenomic Analysis of Trichophyton rubrum Aided by RNA Sequencing. J Proteome Res 2015, 14(5):2207-2218.
  • Li K, Zhang C, Zhao R, Xue Y, Yang J, Peng J, Jin Q: The prevalence of STL polyomavirus in stool samples from Chinese children. J Clin Virol 2015, 66:19-23.
  • Niu Y, Si Y, Li Y, Chi X, Li X, Liu X, Li D, Cheng M, Fan J, Si S, Yang W: A novel small-molecule inhibitor of hepatitis C virus replication acts by suppressing signal transducer and activator of transcription 3. J Antimicrob Chemother 2015, 70(7):2013-2023.
  • Chen Z, Wang J, Bao L, Guo L, Zhang W, Xue Y, Zhou H, Xiao Y, Wu F, Deng Y, Qin C, Jin Q: Human monoclonal antibodies targeting the haemagglutinin glycoprotein can neutralize H7N9 influenza virus. Nat Commun 2015, 6:6714.
  • Zhu W, Lei R, Le Duff Y, Li J, Guo F, Wainberg MA, Liang C: The CRISPR/Cas9 system inactivates latent HIV-1 proviral DNA. Retrovirology 2015, 12:22.
  • Li J, Xu F, Hu S, Zhou J, Mei S, Zhao X, Cen S, Jin Q, Liang C, Guo F: Characterization of the interactions between SIVrcm Vpx and red-capped mangabey SAMHD1. Biochem J 2015, 468(2):303-313.
  • Su Y, Chong H, Qiu Z, Xiong S, He Y: Mechanism of HIV-1 Resistance to Short-Peptide Fusion Inhibitors Targeting the Gp41 Pocket. J Virol 2015, 89(11):5801-5811.
  • Hou N, Piao X, Cai P, Wu C, Liu S, Xiao Y, Chen Q: A novel Schistosoma japonicum endonuclease homologous to DNase II. BMC Genomics 2015, 16:126.
  • Gao L, Lu W, Bai L, Wang X, Xu J, Catanzaro A, Cardenas V, Li X, Yang Y, Du J, Sui H, Xia Y, Li M, Feng B, Li Z, Xin H, Zhao R, Liu J, Pan S, Shen F, He J, Yang S, Si H, Wang Y, Xu Z, Tan Y, Chen T, Xu W, Peng H, Wang Z, Zhu T, Zhou F, Liu H, Zhao Y, Cheng S, Jin Q: Latent tuberculosis infection in rural China: baseline results of a population-based, multicentre, prospective cohort study. Lancet Infect Dis 2015, 15(3):310-319.
  • Guo XP, Ren GX, Zhu H, Mao XJ, Sun YC: Differential regulation of the hmsCDE operon in Yersinia pestis and Yersinia pseudotuberculosis by the Rcs phosphorelay system. Sci Rep 2015, 5:8412.
  • Ren X, Hu Y, Yang F, Xiao Y, Li L, Dong J, Sun L, Zhu Y, Jin Q: Clinical utility comparison of two benchtop deep sequencing instruments for rapid diagnosis of newly emergent influenza infections. Clin Microbiol Infect 2015, 21(3):290 e291-294.
  • Yu Y, Jin D, Hu S, Zhang Y, Zheng X, Zheng J, Liao M, Chen X, Graner M, Liu H, Jin Q: A novel tuberculosis antigen identified from human tuberculosis granulomas. Mol Cell Proteomics 2015, 14(4):1093-1103.
  • Chong H, Qiu Z, Su Y, Yang L, He Y: Design of a highly potent HIV-1 fusion inhibitor targeting the gp41 pocket. AIDS 2015, 29(1):13-21.
  • Zhang Y, Li J, Xiao Y, Zhang J, Wang Y, Chen L, Paranhos-Baccala G, Ren L, Wang J: Genotype shift in human coronavirus OC43 and emergence of a novel genotype by natural recombination. J Infect 2015, 70(6):641-650.
  • Wang J, Peng Y, Zhao L, Cao M, Hung T, Deng T: Influenza A virus utilizes a suboptimal Kozak sequence to fine-tune virus replication and host response. J Gen Virol 2015, 96(Pt 4):756-766.
  • Zhang X, Liu L, Zhang Y, Dai G, Huang H, Jin Q: Genetic determinants involved in p-aminosalicylic acid resistance in clinical isolates from tuberculosis patients in northern China from 2006 to 2012. Antimicrob Agents Chemother 2015, 59(2):1320-1324.


Copyright © 2015 Institute of Pathogen Biology, CAMS & PUMC